decic function of Search Results


decimate.m function  (MathWorks Inc)
90
MathWorks Inc decimate.m function
Decimate.M Function, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/decimate.m function/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
decimate.m function - by Bioz Stars, 2026-04
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dat-cre transgenic mice  (Jackson Laboratory)
90
Jackson Laboratory dat-cre transgenic mice
Quantification of dopamine neuron optogenetic self-stimulation. Validation of the system through dopamine self-stimulation in DAT-CRE <t>transgenic</t> mice. A) Infection site and TH counter stain verifying infection and dopamine selectivity of ChR2-YFP. Scale bar 1 mm. B) Magnified view of the VTA area showing overlap of TH staining and ChR2-YFP expression. Scale bar 100 μm. C) Example track plot of the first and third sessions of a single mouse overlaid with a normalized heatmap illustrating the distribution of time spent on the platform. D) Example image of a mouse nose poking in the active port. E) Quantification of the nose pokes in the active and inactive ports over time (two-way Anova repeated measures, effect across days F(5,20) = 19.76; p < 0.0001, effect between ports F(1,4) = 115.98; p = 0.0004). F) Quantification of the time spent near the active and inactive ports on the first day (2392 ± 102.3SEM and 308 ± 55.87SEM; p < 0.0001 t -test) and the third day (3205 ± 216.5SEM and 59 ± 29.74SEM; p = 0.0001 t -test).
Dat Cre Transgenic Mice, supplied by Jackson Laboratory, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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dat-cre transgenic mice - by Bioz Stars, 2026-04
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spotifre decision site data visualization software  (TIBCO)
90
TIBCO spotifre decision site data visualization software
Quantification of dopamine neuron optogenetic self-stimulation. Validation of the system through dopamine self-stimulation in DAT-CRE <t>transgenic</t> mice. A) Infection site and TH counter stain verifying infection and dopamine selectivity of ChR2-YFP. Scale bar 1 mm. B) Magnified view of the VTA area showing overlap of TH staining and ChR2-YFP expression. Scale bar 100 μm. C) Example track plot of the first and third sessions of a single mouse overlaid with a normalized heatmap illustrating the distribution of time spent on the platform. D) Example image of a mouse nose poking in the active port. E) Quantification of the nose pokes in the active and inactive ports over time (two-way Anova repeated measures, effect across days F(5,20) = 19.76; p < 0.0001, effect between ports F(1,4) = 115.98; p = 0.0004). F) Quantification of the time spent near the active and inactive ports on the first day (2392 ± 102.3SEM and 308 ± 55.87SEM; p < 0.0001 t -test) and the third day (3205 ± 216.5SEM and 59 ± 29.74SEM; p = 0.0001 t -test).
Spotifre Decision Site Data Visualization Software, supplied by TIBCO, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
spotifre decision site data visualization software - by Bioz Stars, 2026-04
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cross-entropy loss function  (SoftMax Inc)
90
SoftMax Inc cross-entropy loss function
Quantification of dopamine neuron optogenetic self-stimulation. Validation of the system through dopamine self-stimulation in DAT-CRE <t>transgenic</t> mice. A) Infection site and TH counter stain verifying infection and dopamine selectivity of ChR2-YFP. Scale bar 1 mm. B) Magnified view of the VTA area showing overlap of TH staining and ChR2-YFP expression. Scale bar 100 μm. C) Example track plot of the first and third sessions of a single mouse overlaid with a normalized heatmap illustrating the distribution of time spent on the platform. D) Example image of a mouse nose poking in the active port. E) Quantification of the nose pokes in the active and inactive ports over time (two-way Anova repeated measures, effect across days F(5,20) = 19.76; p < 0.0001, effect between ports F(1,4) = 115.98; p = 0.0004). F) Quantification of the time spent near the active and inactive ports on the first day (2392 ± 102.3SEM and 308 ± 55.87SEM; p < 0.0001 t -test) and the third day (3205 ± 216.5SEM and 59 ± 29.74SEM; p = 0.0001 t -test).
Cross Entropy Loss Function, supplied by SoftMax Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/cross-entropy loss function/product/SoftMax Inc
Average 90 stars, based on 1 article reviews
cross-entropy loss function - by Bioz Stars, 2026-04
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function block 1724  (Lpath Inc)
90
Lpath Inc function block 1724
Quantification of dopamine neuron optogenetic self-stimulation. Validation of the system through dopamine self-stimulation in DAT-CRE <t>transgenic</t> mice. A) Infection site and TH counter stain verifying infection and dopamine selectivity of ChR2-YFP. Scale bar 1 mm. B) Magnified view of the VTA area showing overlap of TH staining and ChR2-YFP expression. Scale bar 100 μm. C) Example track plot of the first and third sessions of a single mouse overlaid with a normalized heatmap illustrating the distribution of time spent on the platform. D) Example image of a mouse nose poking in the active port. E) Quantification of the nose pokes in the active and inactive ports over time (two-way Anova repeated measures, effect across days F(5,20) = 19.76; p < 0.0001, effect between ports F(1,4) = 115.98; p = 0.0004). F) Quantification of the time spent near the active and inactive ports on the first day (2392 ± 102.3SEM and 308 ± 55.87SEM; p < 0.0001 t -test) and the third day (3205 ± 216.5SEM and 59 ± 29.74SEM; p = 0.0001 t -test).
Function Block 1724, supplied by Lpath Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/function block 1724/product/Lpath Inc
Average 90 stars, based on 1 article reviews
function block 1724 - by Bioz Stars, 2026-04
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bwmorph function  (MathWorks Inc)
90
MathWorks Inc bwmorph function
Quantification of dopamine neuron optogenetic self-stimulation. Validation of the system through dopamine self-stimulation in DAT-CRE <t>transgenic</t> mice. A) Infection site and TH counter stain verifying infection and dopamine selectivity of ChR2-YFP. Scale bar 1 mm. B) Magnified view of the VTA area showing overlap of TH staining and ChR2-YFP expression. Scale bar 100 μm. C) Example track plot of the first and third sessions of a single mouse overlaid with a normalized heatmap illustrating the distribution of time spent on the platform. D) Example image of a mouse nose poking in the active port. E) Quantification of the nose pokes in the active and inactive ports over time (two-way Anova repeated measures, effect across days F(5,20) = 19.76; p < 0.0001, effect between ports F(1,4) = 115.98; p = 0.0004). F) Quantification of the time spent near the active and inactive ports on the first day (2392 ± 102.3SEM and 308 ± 55.87SEM; p < 0.0001 t -test) and the third day (3205 ± 216.5SEM and 59 ± 29.74SEM; p = 0.0001 t -test).
Bwmorph Function, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/bwmorph function/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
bwmorph function - by Bioz Stars, 2026-04
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matlab signal processing toolbox  (MathWorks Inc)
98
MathWorks Inc matlab signal processing toolbox
Quantification of dopamine neuron optogenetic self-stimulation. Validation of the system through dopamine self-stimulation in DAT-CRE <t>transgenic</t> mice. A) Infection site and TH counter stain verifying infection and dopamine selectivity of ChR2-YFP. Scale bar 1 mm. B) Magnified view of the VTA area showing overlap of TH staining and ChR2-YFP expression. Scale bar 100 μm. C) Example track plot of the first and third sessions of a single mouse overlaid with a normalized heatmap illustrating the distribution of time spent on the platform. D) Example image of a mouse nose poking in the active port. E) Quantification of the nose pokes in the active and inactive ports over time (two-way Anova repeated measures, effect across days F(5,20) = 19.76; p < 0.0001, effect between ports F(1,4) = 115.98; p = 0.0004). F) Quantification of the time spent near the active and inactive ports on the first day (2392 ± 102.3SEM and 308 ± 55.87SEM; p < 0.0001 t -test) and the third day (3205 ± 216.5SEM and 59 ± 29.74SEM; p = 0.0001 t -test).
Matlab Signal Processing Toolbox, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 98/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/matlab signal processing toolbox/product/MathWorks Inc
Average 98 stars, based on 1 article reviews
matlab signal processing toolbox - by Bioz Stars, 2026-04
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matlab function 'decimate  (MathWorks Inc)
90
MathWorks Inc matlab function 'decimate
Quantification of dopamine neuron optogenetic self-stimulation. Validation of the system through dopamine self-stimulation in DAT-CRE <t>transgenic</t> mice. A) Infection site and TH counter stain verifying infection and dopamine selectivity of ChR2-YFP. Scale bar 1 mm. B) Magnified view of the VTA area showing overlap of TH staining and ChR2-YFP expression. Scale bar 100 μm. C) Example track plot of the first and third sessions of a single mouse overlaid with a normalized heatmap illustrating the distribution of time spent on the platform. D) Example image of a mouse nose poking in the active port. E) Quantification of the nose pokes in the active and inactive ports over time (two-way Anova repeated measures, effect across days F(5,20) = 19.76; p < 0.0001, effect between ports F(1,4) = 115.98; p = 0.0004). F) Quantification of the time spent near the active and inactive ports on the first day (2392 ± 102.3SEM and 308 ± 55.87SEM; p < 0.0001 t -test) and the third day (3205 ± 216.5SEM and 59 ± 29.74SEM; p = 0.0001 t -test).
Matlab Function 'decimate, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/matlab function 'decimate/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
matlab function 'decimate - by Bioz Stars, 2026-04
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nn model  (MathWorks Inc)
90
MathWorks Inc nn model
Quantification of dopamine neuron optogenetic self-stimulation. Validation of the system through dopamine self-stimulation in DAT-CRE <t>transgenic</t> mice. A) Infection site and TH counter stain verifying infection and dopamine selectivity of ChR2-YFP. Scale bar 1 mm. B) Magnified view of the VTA area showing overlap of TH staining and ChR2-YFP expression. Scale bar 100 μm. C) Example track plot of the first and third sessions of a single mouse overlaid with a normalized heatmap illustrating the distribution of time spent on the platform. D) Example image of a mouse nose poking in the active port. E) Quantification of the nose pokes in the active and inactive ports over time (two-way Anova repeated measures, effect across days F(5,20) = 19.76; p < 0.0001, effect between ports F(1,4) = 115.98; p = 0.0004). F) Quantification of the time spent near the active and inactive ports on the first day (2392 ± 102.3SEM and 308 ± 55.87SEM; p < 0.0001 t -test) and the third day (3205 ± 216.5SEM and 59 ± 29.74SEM; p = 0.0001 t -test).
Nn Model, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/nn model/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
nn model - by Bioz Stars, 2026-04
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clump finding code function  (MathWorks Inc)
90
MathWorks Inc clump finding code function
Quantification of dopamine neuron optogenetic self-stimulation. Validation of the system through dopamine self-stimulation in DAT-CRE <t>transgenic</t> mice. A) Infection site and TH counter stain verifying infection and dopamine selectivity of ChR2-YFP. Scale bar 1 mm. B) Magnified view of the VTA area showing overlap of TH staining and ChR2-YFP expression. Scale bar 100 μm. C) Example track plot of the first and third sessions of a single mouse overlaid with a normalized heatmap illustrating the distribution of time spent on the platform. D) Example image of a mouse nose poking in the active port. E) Quantification of the nose pokes in the active and inactive ports over time (two-way Anova repeated measures, effect across days F(5,20) = 19.76; p < 0.0001, effect between ports F(1,4) = 115.98; p = 0.0004). F) Quantification of the time spent near the active and inactive ports on the first day (2392 ± 102.3SEM and 308 ± 55.87SEM; p < 0.0001 t -test) and the third day (3205 ± 216.5SEM and 59 ± 29.74SEM; p = 0.0001 t -test).
Clump Finding Code Function, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/clump finding code function/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
clump finding code function - by Bioz Stars, 2026-04
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classification learner application  (MathWorks Inc)
90
MathWorks Inc classification learner application
Quantification of dopamine neuron optogenetic self-stimulation. Validation of the system through dopamine self-stimulation in DAT-CRE <t>transgenic</t> mice. A) Infection site and TH counter stain verifying infection and dopamine selectivity of ChR2-YFP. Scale bar 1 mm. B) Magnified view of the VTA area showing overlap of TH staining and ChR2-YFP expression. Scale bar 100 μm. C) Example track plot of the first and third sessions of a single mouse overlaid with a normalized heatmap illustrating the distribution of time spent on the platform. D) Example image of a mouse nose poking in the active port. E) Quantification of the nose pokes in the active and inactive ports over time (two-way Anova repeated measures, effect across days F(5,20) = 19.76; p < 0.0001, effect between ports F(1,4) = 115.98; p = 0.0004). F) Quantification of the time spent near the active and inactive ports on the first day (2392 ± 102.3SEM and 308 ± 55.87SEM; p < 0.0001 t -test) and the third day (3205 ± 216.5SEM and 59 ± 29.74SEM; p = 0.0001 t -test).
Classification Learner Application, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/classification learner application/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
classification learner application - by Bioz Stars, 2026-04
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sas proc calis  (SAS institute)
90
SAS institute sas proc calis
Quantification of dopamine neuron optogenetic self-stimulation. Validation of the system through dopamine self-stimulation in DAT-CRE <t>transgenic</t> mice. A) Infection site and TH counter stain verifying infection and dopamine selectivity of ChR2-YFP. Scale bar 1 mm. B) Magnified view of the VTA area showing overlap of TH staining and ChR2-YFP expression. Scale bar 100 μm. C) Example track plot of the first and third sessions of a single mouse overlaid with a normalized heatmap illustrating the distribution of time spent on the platform. D) Example image of a mouse nose poking in the active port. E) Quantification of the nose pokes in the active and inactive ports over time (two-way Anova repeated measures, effect across days F(5,20) = 19.76; p < 0.0001, effect between ports F(1,4) = 115.98; p = 0.0004). F) Quantification of the time spent near the active and inactive ports on the first day (2392 ± 102.3SEM and 308 ± 55.87SEM; p < 0.0001 t -test) and the third day (3205 ± 216.5SEM and 59 ± 29.74SEM; p = 0.0001 t -test).
Sas Proc Calis, supplied by SAS institute, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
sas proc calis - by Bioz Stars, 2026-04
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Image Search Results


Quantification of dopamine neuron optogenetic self-stimulation. Validation of the system through dopamine self-stimulation in DAT-CRE transgenic mice. A) Infection site and TH counter stain verifying infection and dopamine selectivity of ChR2-YFP. Scale bar 1 mm. B) Magnified view of the VTA area showing overlap of TH staining and ChR2-YFP expression. Scale bar 100 μm. C) Example track plot of the first and third sessions of a single mouse overlaid with a normalized heatmap illustrating the distribution of time spent on the platform. D) Example image of a mouse nose poking in the active port. E) Quantification of the nose pokes in the active and inactive ports over time (two-way Anova repeated measures, effect across days F(5,20) = 19.76; p < 0.0001, effect between ports F(1,4) = 115.98; p = 0.0004). F) Quantification of the time spent near the active and inactive ports on the first day (2392 ± 102.3SEM and 308 ± 55.87SEM; p < 0.0001 t -test) and the third day (3205 ± 216.5SEM and 59 ± 29.74SEM; p = 0.0001 t -test).

Journal: MethodsX

Article Title: Design and construction of a low-cost nose poke system for rodents

doi: 10.1016/j.mex.2016.04.002

Figure Lengend Snippet: Quantification of dopamine neuron optogenetic self-stimulation. Validation of the system through dopamine self-stimulation in DAT-CRE transgenic mice. A) Infection site and TH counter stain verifying infection and dopamine selectivity of ChR2-YFP. Scale bar 1 mm. B) Magnified view of the VTA area showing overlap of TH staining and ChR2-YFP expression. Scale bar 100 μm. C) Example track plot of the first and third sessions of a single mouse overlaid with a normalized heatmap illustrating the distribution of time spent on the platform. D) Example image of a mouse nose poking in the active port. E) Quantification of the nose pokes in the active and inactive ports over time (two-way Anova repeated measures, effect across days F(5,20) = 19.76; p < 0.0001, effect between ports F(1,4) = 115.98; p = 0.0004). F) Quantification of the time spent near the active and inactive ports on the first day (2392 ± 102.3SEM and 308 ± 55.87SEM; p < 0.0001 t -test) and the third day (3205 ± 216.5SEM and 59 ± 29.74SEM; p = 0.0001 t -test).

Article Snippet: To test the functionality of our system we decided to use DAT-CRE transgenic mice (Jackson Laboratory stock number: 006660) injected with DIO-ChR2-EYFP in the VTA and implanted with an optic fiber above this region to deliver light and activate dopamine neurons.

Techniques: Biomarker Discovery, Transgenic Assay, Infection, Staining, Expressing